Table 10 Results of Example 11-1: Centralized query for melanoma using the broader predicate to perform the property path function
Query approach | No. of retrieved mice | No. of retrieved genes | Gene labels (Ensembl Gene IDs) | No. of anatomical entities | Anatomical entity labels (Uberon IDs) |
|---|---|---|---|---|---|
Example_11-1: Centralized query for melanoma using the broader predicate | 102 | 14 | TYR (ENSG00000077498) PPP6C (ENSG00000119414) PIK3CA (ENSG00000121879) BRCA2 (ENSG00000139618) TP53 (ENSG00000141510) AKT1 (ENSG00000142208) ATM (ENSG00000149311) KIT (ENSG00000157404) TERT (ENSG00000164362) CTNNB1 (ENSG00000168036) PTEN (ENSG00000171862) HRAS (ENSG00000174775) MITF (ENSG00000187098) NRAS (ENSG00000213281) | 12 | zone of skin (UBERON_0000014) skin epidermis (UBERON_0001003) skin of abdomen (UBERON_0001416) skin of limb (UBERON_0001419) skin of leg (UBERON_0001511) skin of hip (UBERON_0001554) hair follicle (UBERON_0002073) skin of body (UBERON_0002097) forelimb skin (UBERON_0003531) hindlimb skin (UBERON_0003532) upper leg skin (UBERON_0004262) upper arm skin (UBERON_0004263) |