Table 9 The average runtime from 10 executions of the SPARQL query Examples 11–1 and 11-2
Query approach | Target diseases | Which Uberon data was used | Mean of runtime |
|---|---|---|---|
Example 11-1 | melanoma | The Uberon data converted from KGX stored in the BioResource MetaDB (Centralized approach) | 627 s |
Example 11-2 | The Ubergraph data through the SPARQL endpoint (federated approach) | Transaction timed out (over 3600 s) |